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. 2022 Nov 29;10(12):2364. doi: 10.3390/microorganisms10122364

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© 2022 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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Core genome based minimum spanning tree containing an overview of the diversity contained in the tested dataset. The annotations are (from inner to outer rings): sample name, sequence type determined with the MLST and cgMLST scheme of Enterobase, sample serotype, antigenic profile, the number of virulence genes detected, the number of AMR genes detected and the number of plasmid replicons detected. The number of virulence genes, AMR genes and plasmid replicons are indicated according to the color legend. Full detailed information on the metadata for the characteristics of the isolates is available in Table S4.