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. 2022 Oct 4;165(1):49–63. doi: 10.1530/REP-22-0240

Table 1.

Primer sequences and annealing temperatures of the studied mouse templates.

Target Forward primer Reverse primer Tann (°C)
MajorSR 5′-GACGACTTGAAAAATGACGAAATC-3′ 5′-CATATTCCAGGTCCTTCAGTGTGC-3′ 57
MinorSR 5′-CATGGAAAATGATAAAAACC-3′ 5′-CATCTAATATGTTCTACAGTGTGG-3′ 57
Line1 5′-TTTGGGACACAATGAAAGCA-3′ 5′-CTGCCGTCTACTCCTCTTGG-3′ 60
SineB1 5′-GTGGCGCACGCCTTTAATC-3′ 5′-GACAGGGTTTCTCTGTGTAG-3′ 60
SineB2 5′-GAGATGGCTCAGTGGTTAAG-3′ 5′-CTGTCTTCAGACACTCCAG-3′ 60
IAP 5′-AGCAGGTGAAGCCACTG-3′ 5′-CTTGCCACACTTAGAGC-3′ 62
Gapdh 5′-AGTGCCAGCCTCGTCCCGTA-3′ 5′-AGGCGCCCAATACGGCCAAA-3′ 57
18S 5′-GTAGTCGCCGTGCCTACCAT-3′ 5′-TTTTCGTCACTACCTCCCCG-3′ 60

18S, 18S ribosomal DNA; Gapdh, glyceraldehyde 3-phosphate dehydrogenase; IAP, intracisternal A particle; Line1, long interspersed nuclear element 1; Sine B1, short interspersed nuclear element B1; SR, satellite repeat; Tann, annealing temperature.