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. 2022 Dec 8;11(12):1496. doi: 10.3390/pathogens11121496

Table 4.

Primers used for amplification of genes/fragments of 16S rRNA genes in the identification of Gordonia.

Primer Name Primer Sequence Species Identified Reference
1 P8-27 5′-AGA GTT TGA TCC TGG CTC AG-3′ universal [52,63,100]
P1392-1372 5′-AAG GCC CGG GAA CGT ATT CAC-3′
2 16S-F 5′-AGA GTT TGA TCC TGG CTC AG-3′ G. bronchialis [76]
16S-R 5′-ACG GCT ACC TTG TTA CGA CTT-3′
3 fD1 5′-CCG AAT TCG TCG ACA ACA GAG TTT GAT CCT GGC TCA G-3′ G. polyisoprenivorans [54]
rD1 5′-CCC GGG ATC CAA GCT TAA GGA GGT GAT CCA GCC-3′
4 27FLP 5′-AGA GTT TGA TCM TGG CTC AG-3′ G. terrae [55]
1492RPL 5′-GGT TAC CTT GTT ACG ACT T-3′
5 - 5′-TGG AGA GTT TGA TCC TGG CTC AG-3′ G. bronchialis [101]
- 5′-TAC CGC GGC TGC TGG CAC-3′
6 BACT 5′-CAG GCC TAA CAC ATG CAA GTC-3′ G. sputi [58]
UNI 5′-GAC GGG CGG TGT GTA CAA-3′
7 G268F 5′-CGA CCT GAG AGG GTG ATC G-3′ G. sputi, G. bronchialis, G. terrae/lacumae [79,102]
G1096R 5′-ATA ACC CGC TGG CAA TAC AG-3′
8 8FLP 5′-AGA GTT TGA TCC TGG CTC AG-3′ G. terrae, G. sputi [103]
1492RPL 5′-GGT TAC CTT GTT ACG ACT T-3′
9 5F 5′-TTG GAG AGT TTG ATC CTG GCT C-3′ G. terrae, G. otitidis, G. bronchialis [52]
1194R 5′-ACG TCA TCC CCA CCT TCC TC-3′
10 27FI 5′-AGA GTT TGA TCC TGG CTC AG-3′ G. sputi [104,105]
1494Rc 5′-TAC GGC TAC CTT GTT ACG AC-3′
11 fD1 5′-CCG AAT TCG TCG ACA ACA GAG TTT GAT CCT GGC TCA G-3′ G. bronchialis [106,107]
rP2 5′-CCC GGG ATC CAA GCT TAC GGC TAC CTT GTT ACG ACT T-3′
12 27F 5′-GAG TTT GAT CCT GGC TCA G-3′ G. terrae [56]
1492R 5′-AAG GAG GTG ATC CAG CCG CA-3′
13 5F 5′-TGG AGA GTT TGA TCC TGG CTA G-3′ G. sputi, G. otitidis, G. bronchialis [71]
1193R 5′-ACG TCA TCC CCG CTT CCT T-3′
14 w001 5′-AGA GTT TGA TCM TGG CTC-3′ G. bronchialis [80,108]
w002 5′-GNT ACC TTG TTA CGA CTT-3′