Table 5.
Top 10 homologous GO templates in PDB generated by using I-TASSER server
| Rank | 1CscoreGO | 2TM-score | 3RMSDa | 4IDENa | 5Cov. | PDB Hit | Associated GO Terms | 
|---|---|---|---|---|---|---|---|
| 1 | 0.48 | 0.8621 | 1.11 | 0.36 | 0.88 | 1schA | GO:0042744, GO:0055114, GO:0004601, GO:0046872, GO:0005576, GO:0016491, GO:0006979, GO:0,020,037 | 
| 2 | 0.47 | 0.8603 | 1.45 | 0.35 | 0.89 | 1fhfA | GO:0004601, GO:0006979, GO:0020037, GO:0055114 | 
| 3 | 0.46 | 0.8466 | 1.35 | 0.37 | 0.87 | 1qgjA | GO:0005634, GO:0042744, GO:0016491, GO:0046872, GO:0005576, GO:0055114, GO:0005737, GO:0004601, GO:0006979, GO:0020037 | 
| 4 | 0.46 | 0.8723 | 1.25 | 0.36 | 0.90 | 1pa2A | GO:0004601, GO:0005576, GO:0042744, GO:0055114, GO:0016491, GO:0046872, GO:0006979, GO:0020037 | 
| 5 | 0.44 | 0.8680 | 1.40 | 0.34 | 0.90 | 1gx2A | GO:0004601, GO:0016491, GO:0042744, GO:0055114, GO:0046872, GO:0005773, GO:0005576, GO:0006979, GO:0020037 | 
| 6 | 0.44 | 0.8946 | 0.38 | 0.36 | 0.90 | 3hdlA | GO:0004601, GO:0006979, GO:0020037, GO:0055114 | 
| 7 | 0.44 | 0.8710 | 1.50 | 0.34 | 0.91 | 1bgpA | GO:0046872, GO:0055114, GO:0016491, GO:0004601, GO:0006979, GO:0020037 | 
| 8 | 0.43 | 0.6619 | 2.08 | 0.25 | 0.71 | 1oafA | GO:0055114, GO:0005737, GO:0042744, GO:0016688, GO:0046872, GO:0004601 GO:0,016,491 GO:0,006,950 GO:0,006,979 GO:0,020,037 | 
| 9 | 0.40 | 0.6526 | 2.70 | 0.22 | 0.72 | 1cyfA | GO:0004601, GO:0006979, GO:0020037, GO:0055114 | 
| 10 | 0.40 | 0.6516 | 2.31 | 0.26 | 0.70 | 3riwB | GO:0004601, GO:0006979, GO:0020037, GO:0055114 | 
1. CscoreGO is a combined measure for evaluating the global and local similarity between query and template protein. Its range is [0–1], and higher values indicate more confident predictions. 2. TM-score measures global structural similarity between query and template protein. 3. RMSDa is the RMSD between residues that are structurally aligned by TM-align. 4. IDENa is the percentage sequence identity in the structurally aligned region. 5. Cov. represents the coverage of global structural alignment and is equal to the number of structurally aligned residues divided by the length of the query protein