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. 2022 Dec 8;8(12):e12207. doi: 10.1016/j.heliyon.2022.e12207

Table 3.

Oligonucleotide sequences against their specific target pathogen.

Target pathogen Oligonucleotide sequences References
Phytophthora palmivora (Butler) Butler Detector probe: (5′- CGA ACA CTC CTC CAT TAA CGC CAC AGC AGA-3′);
Capture probe: (5′- CCA CAA TCA GCA ACG CCA CGC TTT TGG AGC -3′)
Franco et al. (2019)
Citrus tristeza virus (CTV) Thiolated ssDNA probe: 5‘- GGATCGATGTGTAA-3‘-(CH2)6‒HS;
Target ssDNA (fully complementary; characteristic of CTV): 5’-TTACACATCGATCC -3’;
Partially non complementary ssDNA (characteristic of Psorosis virus): 5′-TTACACAAGGATCT-3’;
Fully non complementary ssDNA 5‘- TAGGATTAGCCGCATTCAGG-3’ as control sequence
Khater et al. (2019)
Pseudomonas syringae DC3000 (Psy) 5′-Forward-3′: TACACAGCAC(C3)TTTGTCCGAAACGACGTAC-AGCCATTTAACCTT
5′-Reverse-3′:
Biotin-TTCTACGTCGGGGTATTTACTAGCTGG AAAAG
Capture probe: GTGCTGTGTATTTTT-SH
Lau et al. (2017)