Table 1.
Cluster | Cluster N. | EPRV-RT-seqs | N.Classes | N.Orders | N.Families | N.Genus | N.Species | A | B | Max.Age (MY) |
---|---|---|---|---|---|---|---|---|---|---|
BADNAVIRUS | 80 | 3 | 10 | 11 | 12 | 13 | ||||
Badnavirus-01 | 20 | 75 | 2 | 9 | 10 | 12 | 12 | Dioscorea | Amborella | 191 |
Badnavirus-02 | 43 | 5 | 1 | 2 | 2 | 2 | 2 | Phalaenopsis | Musa | 117 |
CAULIMOVIRUS | 38 | 1 | 4 | 4 | 6 | 9 | ||||
Caulimovirus-01 | 28 | 36 | 1 | 3 | 3 | 5 | 8 | Helianthus | Arabidopsis | 118 |
Caulimovirus-02 | 52 | 2 | 1 | 1 | 1 | 1 | 1 | Gossypium | Gossypium | 0 |
DIOSCOVIRUS | 144 | 2 | 5 | 5 | 7 | 9 | ||||
Dioscovirus-01 | 23 | 49 | 1 | 3 | 3 | 4 | 5 | Cynara | Cajanus | 118 |
Dioscovirus-02 | 25 | 43 | 1 | 1 | 1 | 1 | 2 | Dioscorea | Dioscorea | 0 |
Dioscovirus-03 | 31 | 24 | 1 | 1 | 1 | 2 | 2 | Glycine | Vigna | 23 |
Dioscovirus-04 | 34 | 16 | 1 | 1 | 1 | 1 | 1 | Macadamia | Macadamia | 0 |
Dioscovirus-05 | 35 | 12 | 1 | 1 | 1 | 1 | 2 | Dioscorea | Dioscorea | 0 |
PETUVIRUS | 1693 | 2 | 14 | 16 | 47 | 66 | ||||
Petuvirus-01 | 1 | 1202 | 1 | 5 | 5 | 10 | 19 | Arachis | Citrus | 108 |
Petuvirus-02 | 14 | 131 | 1 | 9 | 9 | 16 | 18 | Amborella | Helianthus | 191 |
Petuvirus-03 | 15 | 129 | 1 | 3 | 4 | 6 | 9 | Coffea | Gossypium | 118 |
Petuvirus-04 | 19 | 78 | 1 | 1 | 1 | 11 | 13 | Brassica | Rorippa | 27 |
Petuvirus-05 | 22 | 52 | 1 | 1 | 1 | 1 | 1 | Ipomoea | Ipomoea | 0 |
Petuvirus-06 | 27 | 39 | 1 | 1 | 1 | 7 | 9 | Arachis | Cicer | 59 |
Petuvirus-07 | 30 | 24 | 1 | 3 | 3 | 4 | 6 | Populus | Gossypium | 108 |
Petuvirus-08 | 33 | 18 | 1 | 1 | 1 | 3 | 8 | Citrus | Atalantia | 18 |
Petuvirus-09 | 36 | 12 | 1 | 2 | 2 | 2 | 2 | Durio | Macadamia | 123 |
Petuvirus-10 | 39 | 8 | 1 | 1 | 1 | 1 | 1 | Eucalyptus | Eucalyptus | 0 |
SOLENDOVIRUS | 1124 | 1 | 2 | 2 | 5 | 8 | ||||
Solendovirus-01 | 3 | 1124 | 1 | 2 | 2 | 5 | 8 | Nymphaea | Nicotiana | 179 |
SOYMOVIRUS | 454 | 1 | 5 | 6 | 12 | 14 | ||||
Soymovirus-01 | 6 | 391 | 1 | 1 | 1 | 1 | 3 | Arachis | Arachis | 0 |
Soymovirus-02 | 24 | 49 | 1 | 4 | 5 | 6 | 6 | Lactuca | Cleome | 118 |
Soymovirus-03 | 42 | 6 | 1 | 1 | 1 | 1 | 1 | Chenopodium | Chenopodium | 0 |
Soymovirus-04 | 44 | 5 | 1 | 1 | 1 | 3 | 3 | Brassica | Cakile | 13 |
Soymovirus-05 | 48 | 3 | 1 | 1 | 1 | 1 | 1 | Medicago | Medicago | 0 |
TUNGROVIRUS | 308 | 2 | 5 | 5 | 10 | 32 | ||||
Tungrovirus-01 | 8 | 251 | 1 | 3 | 3 | 10 | 29 | Prunus | Vitis | 117 |
Tungrovirus-02 | 29 | 32 | 1 | 1 | 1 | 1 | 1 | Lindenbergia | Lindenbergia | 0 |
Tungrovirus-03 | 38 | 9 | 1 | 1 | 1 | 1 | 1 | Cinnamomum | Cinnamomum | 0 |
Tungrovirus-04 | 46 | 4 | 1 | 1 | 1 | 1 | 2 | Malus | Malus | 0 |
Tungrovirus-05 | 54 | 2 | 1 | 1 | 1 | 1 | 1 | Citrus | Citrus | 0 |
FLORENDOVIRUS | 6162 | 3 | 29 | 40 | 91 | 151 | ||||
Florendovirus-01 | 0 | 3207 | 2 | 27 | 34 | 70 | 114 | Asparagus | Amborella | 191 |
Florendovirus-02 | 2 | 1188 | 1 | 6 | 8 | 21 | 35 | Brassica | Nicotiana | 118 |
Florendovirus-03 | 4 | 949 | 2 | 21 | 27 | 38 | 47 | Asparagus | Amborella | 191 |
Florendovirus-04 | 7 | 317 | 1 | 2 | 2 | 2 | 3 | Coffea | Lindenbergia | 77 |
Florendovirus-05 | 12 | 133 | 1 | 1 | 1 | 3 | 5 | Arachis | Lotus | 59 |
Florendovirus-06 | 13 | 132 | 1 | 2 | 2 | 5 | 8 | Lindenbergia | Nicotiana | 79 |
Florendovirus-07 | 16 | 120 | 1 | 8 | 9 | 13 | 18 | Amborella | Brassica | 191 |
Florendovirus-08 | 18 | 79 | 1 | 2 | 2 | 7 | 8 | Glycine | Manihot | 101 |
Florendovirus-09 | 41 | 7 | 1 | 1 | 2 | 2 | 2 | Capsicum | Nicotiana | 24 |
Florendovirus-10 | 47 | 4 | 1 | 1 | 1 | 2 | 2 | Cucumis | Momordica | 48 |
Florendovirus-11 | 51 | 2 | 2 | 2 | 2 | 2 | 2 | Asparagus | Prunus | 160 |
GYMNENDOVIRUS | 95 | 1 | 1 | 1 | 2 | 3 | ||||
Gymnendovirus-1-1 | 17 | 95 | 1 | 1 | 1 | 2 | 2 | Pinus | Picea | 130 |
WENDOVIRUS | 282 | 1 | 7 | 7 | 10 | 17 | ||||
Wendovirus-01 | 9 | 200 | 1 | 1 | 1 | 4 | 11 | Citrus | Atalantia | 18 |
Wendovirus-02 | 21 | 70 | 1 | 2 | 2 | 3 | 3 | Helianthus | Coffea | 101 |
Wendovirus-03 | 40 | 7 | 1 | 2 | 2 | 3 | 4 | Citrus | Solanum | 118 |
Wendovirus-04 | 49 | 3 | 1 | 1 | 1 | 1 | 1 | Lindenbergia | Lindenbergia | 0 |
Wendovirus-05 | 55 | 1 | 1 | 1 | 1 | 1 | 1 | Olea | Olea | 0 |
Wendovirus-06 | 56 | 1 | 1 | 1 | 1 | 1 | 1 | Portulaca | Portulaca | 0 |
XENDOVIRUS | 65 | 1 | 6 | 6 | 8 | 10 | ||||
Xendovirus-01 | 26 | 41 | 1 | 4 | 4 | 6 | 8 | Vaccinium | Rosa | 118 |
Xendovirus-02 | 32 | 19 | 1 | 1 | 1 | 1 | 1 | Olea | Olea | 0 |
Xendovirus-03 | 45 | 5 | 1 | 1 | 1 | 1 | 1 | Ipomoea | Ipomoea | 0 |
YENDOVIRUS | 334 | 2 | 6 | 7 | 17 | 23 | ||||
Yendovirus-01 | 10 | 190 | 1 | 1 | 1 | 9 | 11 | Oryza | Eleusine | 47 |
Yendovirus-02 | 11 | 142 | 2 | 5 | 5 | 8 | 12 | Dioscorea | Solanum | 160 |
Yendovirus-03 | 50 | 3 | 2 | 2 | 2 | 2 | 2 | Ananas | Nymphaea | 179 |
ZENDOVIRUS | 781 | 1 | 2 | 2 | 5 | 19 | ||||
Zendovirus-01 | 5 | 768 | 1 | 1 | 1 | 4 | 18 | Fragaria | Rubus | 41 |
Zendovirus-02 | 37 | 11 | 1 | 1 | 1 | 2 | 4 | Fragaria | Rosa | 31 |
Zendovirus-03 | 53 | 2 | 1 | 1 | 1 | 1 | 1 | Pistacia | Pistacia | 0 |