Table 3. Numbers (and Percentages of the Complete Enamine Set of 1,963,425 Compounds) of Predicted Active Compounds Delivered by Each of the 16 Models.
| method | XGBoost - active (% of total) | CP - active (% of total) |
|---|---|---|
| PCM all | 64,251 (3.72%) | 124,599 (6.35%) |
| PCM (OATP1B1 only) | 76,563 (3.90%) | 141 (0.01%) |
| PCM (OATP1B3 only) | 23,909 (1.22%) | 0 (0.00%) |
| PCM (OATP2B1 only) | 343 (0.02%) | 704,646 (35.89%) |
| QSAR all | 63,140 (3.23%) | 193,303 (9.85%) |
| QSAR (OATP1B1 only) | 170,892 (8.73%) | 925 (0.05%) |
| QSAR (OATP1B3 only) | 52,011 (2.66%) | 1,209 (0.06%) |
| QSAR (OATP2B1 only) | 19,412 (0.99%) | 2,047 (0.10%) |