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. 2022 Dec 12;3(12):100844. doi: 10.1016/j.xcrm.2022.100844
REAGENT or RESOURCE SOURCE IDENTIFIER
Deposited data

Summary statistics, PAN-UK BioBank Pan-UKB team. https://pan.ukbb.broadinstitute.org. 2020 https://pan.ukbb.broadinstitute.org/
TOPMed data, by study Taliun et al.31 Amish: phs000956, ARIC: phs001211, CARDIA: phs001612, CHS: phs001368, FHS: phs000974, HCHS_SOL: phs001395, JHS: phs000964, MESA: phs001416

Software and algorithms

All original computer code This paper https://github.com/tamartsi/HE_Genetic_Correlation
Principal Components, kinship matrices, unrelated individuals This paper TOPMed DCC pipeline https://github.com/UW-GAC/analysis_pipeline
GCTA Yang et al.57 https://yanglab.westlake.edu.cn/software/gcta/#Overview
R package: igraph Csardi et al.58 https://igraph.org/r/
R package: qgraph Epskamp et al.59 https://cran.r-project.org/web/packages/qgraph/index.html
R package: corrplot Friendly60 https://cran.r-project.org/web/packages/corrplot/vignettes/corrplot-intro.html
ldsc package Bulik-Sullivan28 https://github.com/bulik/ldsc
cov-LDSC Luo34 https://github.com/immunogenomics/cov-ldsc