TABLE 3.
AMR genotypic combinations in Salmonella serovars recovered from imported chicken meat batches imported into England during 2014–2019
| Serovar (No. isolates), country year | Number of isolates (number of batches) | Genotypic combinations |
|---|---|---|
| S. Heidelberg (138) | ||
| Brazil 2017, 2018 | 95 (49) | bla CMY‐2, sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy |
| Brazil 2017 | 2 (1) | bla CMY‐2, sul2, tetA, gyrA(83:SF), parC(57:TS), dfrA1, aac(6)‐Iy |
| Brazil 2017 | 2 (2) | bla CMY‐2,sul1, sul2, tetA, gyrA(83:SF); parC(57:TS), aac(6)‐Iy, aac(3)‐Via, aadA‐1 |
| Brazil 2017 | 1 | bla CMY‐2,sul2, tetA, gyrA(83:SF), parC(57:TS), qnrB19, aac(6)‐Iy |
| Brazil 2017 | 2 (2) | bla CMY‐2,sul2, tetA, gyrA(83:SF), parC(57:TS), dfrA1, floR, aac(6)‐Iy, aph(6)‐Id, strA, strB |
| Brazil 2017 | 1 | bla CMY‐2,sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy, aph(6)‐Id, strA, strB |
| Brazil 2017, 2018 | 6 (2) | bla CTX‐M‐2,sul1, sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy, aac(3)‐Via, aadA1 |
| Brazil and country unknown 2017 | 2 (2) | bla CTX‐M‐8,sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy |
| Brazil 2017 | 1 | bla CTX‐M‐2, bla TEM‐1, sul1, sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy, aac(3)‐Via, aph(6)‐Id, strA, strB, mphB |
| Brazil 2017 | 1 | bla CTX‐M‐2, bla CTX‐M‐55, sul1, sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy, aac(3)‐Via, aadA‐1 |
| Brazil 2017 | 1 | bla CMY‐54, sul2, tetA, gyrA(83:S‐F), parC(57:T‐S), aac(6)‐Iy |
| Brazil 2017 | 2 (2) | bla TEM‐1, sul1, sul2, tetA, gyrA(83:SF), parC(57:TS), aac(3)‐Via, aac(6)‐Iy, strA, strB, mphB |
| Brazil 2017 | 1 | bla BIL‐1‐, sul2, tetA, gyrA(83:S‐F); parC(57:T‐S), aac(6)‐Iy |
| Brazil 2017 | 12 (8) | sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy |
| Brazil 2017 | 5 (1) | sul2, tetA, gyrA(83:SF), parC(57:TS), aac(6)‐Iy, mphB |
| Brazil 2018 | 3 (1) | sul2, tetA, gyrA(83:SF), parC(57:TS), qnrB19, aac(6)‐Iy |
| S. Minnesota (22) | ||
| Brazil 2017, 2018 | 8 (5) | bla CMY‐2, sul2, tetA, parC(57:TS), qnrB19, aac(6)‐Iy, aadA1b |
| Brazil 2017, 2018 | 6 (5) | bla CMY‐2, sul2, tetA, parC(57:TS), qnrB19, aac(6)‐Iy |
| Brazil 2017 | 5 (1) | bla CMY‐2, sul2, tetA, parC(57:TS), aac(6)‐Iy, aadA1b |
| Brazil 2018 | 1 | bla CMY‐2, sul2, tetA, parC(57:TS), aac(6)‐Iy |
| Brazil 2017 | 1 | bla CMY‐2, sul2, tetA, parC(57:TS), qnrB19, aac(6)‐Iy |
| Thailand 2017 | 1 | bla CMY‐2, bla CTX‐M‐8, sul2, tetA, parC(57:TS), qnrB19 |
| S. Enteritidis (16) | ||
| Thailand 2015, 17, 18 | 11 (6) | bla TEM‐135, gyrA(87:DY), aac(6)‐Iy |
| Thailand 2016, 17 | 4 (3) | gyrA(87:DY), aac(6)‐Iy |
| Brazil 2017 | 1 | gyrA(87:DN), aac(6)‐Iy |
| S. Infantis (11) | ||
| Chile 2018 | 2 (1) |
bla CTX‐M‐65, sul1, tetA, gyrA(87:DY), parC(57:TS), floR, aac(6)‐Iy, aac(3)‐Iva, aadD, aph(4)‐Ia, |
|
Chile 2018 Brazil 2017 |
3 (2) 1 |
sul1, tetA, gyrA(87:DY), parC(57:TS), dfrA14, aac(6)‐Iy |
| Israel 2015 | 3 (1) | sul1, tetA, gyrA(87:DY), parC(57:TS), aac(6)‐Iy |
| Chile 2018 | 1 |
sul1, tetA, gyrA(87:DY), parC(57:TS), floR, fosA3, aac(6)‐Iy, aac(3)‐Iva, aadD, aph(4)‐Ia |
| Israel 2015 | 1 | parC(57:TS), aac(6)‐Iy |
| S. Agona (11) | ||
| Thailand 2017 | 5 (2) | bla TEM‐1, sul3, tetA, parC(57:TS), qnrS1, dfrA14, aac(6)‐Iy |
| Brazil 2017 | 5 (1) | parC(57:TS), aac(6)‐Iy |
| Thailand 2014 | 1 | bla TEM‐117, parC(57:TS), lnuF, aac(6)‐Iy, aac(3)‐IId, aadA2, aadA17 |
| S. Albany (9) | ||
|
Thailand 2014 Unknown 2017 |
5 (3) 1 |
bla TEM‐117, parC(57:TS), aac(6)‐Iaa, aac(3)‐IId, aadA2, aadA17, lnuF |
| Thailand 2015, 2016 | 2 (2) | bla TEM‐117, parC(57:TS), aac(6)‐Iaa, aadA2, aadA17, lnuF |
| Thailand 2015 | 1 | bla CARB‐2, sul1, tet(G), gyrA(87:DN), parC(57:TS), dfrA1, floR, aac(6)‐Iaa |
| S. Kedougou (5) | ||
| Thailand 2017 | 5 (1) | aac(6)‐Iaa |
| S. Braenderup (4) | ||
| Thailand and unknown 2017 | 4 (2) | gyrA(87:D‐Y), parC(57:TS), aac(6)‐Iaa |
| S. Give (3) | ||
| Thailand 2015, 2017 Unknown 2017 |
2 (2) 1 |
gyrA(83:S‐Y), parC(57:TS), aac(6)‐Iy |
| S. Typhimurium (3) | ||
| Thailand 2014 | 1 | bla TEM‐191, sul2, tetA, aac(6)‐Iaa, aac(3)‐IId, aadA2, aadA17, aph(6)‐Id, strB, strA, lnuF, |
| Thailand 2016 | 1 | bla TEM‐117, aac(6)‐Iaa, aac(3)‐IId, aadA2, aadA17, lnuF |
| Thailand 2016 | 1 | aac(6)‐Iaa |
| S. Mbandaka (2) | ||
| Thailand and unknown country 2017 | 2 (2) | parC(57:TS), aac(6)‐Iaa |
| S. Poona (2) | ||
| Thailand 2016 | 2 (1) | parC(57:TS), aac(6)‐Iaa |
| S. Weltevreden (2) | ||
| Thailand 2017 | 2 (1) | tetA, parC(57:TS), aac(6)‐Iaa |
| S. Binza (1) | ||
| Thailand 2015 | 1 | bla TEM‐1, sul3, tetA, gyrA(83:SY), parC(57:TS), dfrA12, cml1, aac(6)‐Iy, aadA2, aadA12, lnuF, mefB |
| S. Hvittingfoss (1) | ||
| Thailand 2017 | 1 | aac(6)‐Iaa |
| S. Virchow (1) | ||
| Thailand 2015 | 1 | gyrA(87:DY), aac(6)‐Iy |