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. 2022 Nov-Dec;32(11-12):2107–2118. doi: 10.1101/gr.276871.122

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© 2022 Bzikadze et al.; Published by Cold Spring Harbor Laboratory Press

This article is distributed exclusively by Cold Spring Harbor Laboratory Press for the first six months after the full-issue publication date (see https://genome.cshlp.org/site/misc/terms.xhtml). After six months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

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Figure 3. — Visualization of VerityMap, Winnowmap2, and minimap2 alignments of simulated reads from the CenX-Diploid data set to the CenX-Diploid-Switch sequence using the IGV browser (Robinson et al. 2011). VerityMap, in difference from Winnowmap2 and minimap2, reveals the haplotype-switch breakpoint.