REAGENT or RESOURCE | SOURCE | IDENTIFIER |
---|---|---|
Antibodies | ||
Mouse monoclonal Anti-GAPDH | EMD Millipore | Cat# MAB374 |
Rabbit monoclonal Anti-HRAS | Proteintech | Cat# 18295-1-AP |
Mouse monoclonal Anti-KRAS | Sigma | Cat# WH0003845M1 |
Rabbit monoclonal Anti-MYC | Cell Signaling Technologies | Cat# 5605S |
Mouse monoclonal Anti-NRAS | Santa Cruz Biotechnologies | Cat# sc-31 |
Rabbit monoclonal Anti-phospho-AKT S473 | Cell Signaling Technologies | Cat# 4060S |
Rabbit monoclonal Anti-phospho-EGFR Y1068 | Abcam | Cat# ab5644 |
Rabbit monoclonal Anti-phospho | ||
ERK1/2 T202/Y204 | Cell Signaling Technologies | Cat#4370S |
Rabbit monoclonal Anti-phospho-FGFR3 Y724 | Abcam | Cat#ab155960 |
Rabbit monoclonal Anti-phospho-HER2 Y1248 | Cell Signaling Technologies | Cat# 2247S |
Rabbit monoclonal Anti-phospho-MEK S217/S221 | Cell Signaling Technologies | Cat#9154S |
Rabbit monoclonal Anti-phospho-RSK1 S363/T359 | Abcam | Cat#ab32413 |
Rabbit monoclonal Anti-phospho-SHP2 Y542 | Cell Signaling Technologies | Cat#3751S |
Amersham ECL Mouse IgG, | ||
HRP-linked whole Ab (from sheep) | GE Life Sciences | Cat# NA931-1ML |
Amersham ECL Rabbit IgG, | ||
HRP-linked whole Ab | GE Life Sciences | Cat# NA934-1ML |
Biological samples | ||
Patient Derived Xenografts (PDX) | University of Texas MD Anderson Cancer Center |
https://www.pdxnetwork.org/md-anderson |
Chemicals, peptides, and recombinant proteins | ||
AMG 510 (KRASG12C inhibitor) | MedChemExpress | Cat# HY-114277 |
ARS-1620 (KRASG12C inhibitor) | Sellechckem | Cat# S8707 |
BGJ398 (FGFR inhibitor) | Chemietek | Cat# CT-BGJ398 |
MRTX849 (KRASG12C inhibitor) | MedChemExpress | Cat# HY-130149 |
Panitumumab (Vectabix, EGFR mAb) | McKesson | Cat #765995 |
RM-018 (KRASG12C inhibitor) | Revolution Medicines | N/A |
RMC-4450 (SHP2 inhibitor, in vitro) | Selleckchem | S8718 |
RMC-4550 (SHP2 inhibitor, in vivo) | Revolution Medicines | N/A |
Trametinib (MEK inhibitor) | Selleckchem | Cat# S2673 |
Critical commercial assays | ||
Active Ras detection kit | Cell Signaling Technologies | Cat# 8821 |
Human Phospho-Receptor | ||
Tyrosine Kinase Array Kit | R&D systems | Cat # ARY001B |
Lipofectamine RNAiMAX | Life Technologies | Cat# 13778100 |
Thermo ScientificTM SuperSignalTM West | ||
Femto Chemiluminescent Substrate | Thermo Fisher | Cat# PI34096 |
Experimental models: Cell lines | ||
Human B8182 colorectal adenocarcinoma | MD Anderson cell line bank | Katsiampoura et al. (2017)(1) |
Human F3008 colorectal adenocarcinoma | MD Anderson cell line bank | Katsiampoura et al. (2017)(1) |
Human LIM-2099 colorectal adenocarcinoma | Millipore Sigma | Cat# 12062002-1VL |
Human MGH-1088 lung adenocarcinoma | Center for Molecular Therapeutics at the MGH Cancer Center | Crystal et al., 2014 (2) |
Human MGH-1062 lung adenocarcinoma | Center for Molecular Therapeutics at the MGH Cancer Center | Crystal et al., 2014 (2) |
Human MIA PaCa-2 pancreatic adenocarcinoma | ATCC | Cat# CRL-1420 |
Human NCI-H358 lung adenocarcinoma | ATCC | Cat# CRL-5807 |
Human SW837 colorectal adenocarcinoma | Center for Molecular Therapeutics at the MGH Cancer Center | ATCC, Cat# CCL-235 |
Human SW1463 colorectal adenocarcinoma | ATCC | Cat# CCL-234 |
Experimental models: Organisms/strains | ||
Mouse, Nude, Crl:NU(NCr)-Foxn1nu, 6-8 wk female | Charles River Laboratories | N/A |
Mouse, NOD/SCID, NOD.CB17-Prkdcscid/NCrCrl 8-week old female mice | Charles River Laboratories | N/A |
Oligonucleotides | ||
ON-Target Plus SMART pool Human HRAS | Dharmacon | L-003919-00-0005 |
ON-Target Plus SMART pool Human NRAS | Dharmacon | L-004142-00-0005 |
On-Target Plus Control Pool | Dharmacon | D-001810-10-05 |
Other | ||
RPPA Arrays | MDA Anderson RPPA core facility |
https://www.mdanderson.org/research/research-resources/core-facilities/functional-proteomics-rppa-core.html |
Software and algorithms | ||
GeneSys Acquisition Software, Version 1.4.1.1 | Syngene | N/A |
GraphPad Prism 6 Software | GraphPad | N/A |
ImageJ | NIH | N/A |
MORPHEUS software | Broad Institute | https://software.broadinstitute.org/morpheus/ |