Table 2.
List of annotated genes in Cyclamen chloroplast genomes.
| Gene group | Gene name |
|---|---|
| Ribosomal RNAs | rrn16(2), rrn23(2), rrn4.5(2), rrn5(2) |
| Transfer RNAs | trnA-UGC*(2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-GCC, trnH-GUG, trnI-GAU*(2), trnI-CAU(2), trnK-UUU*, trnL-CAA(2), trnL-UAA*, trnL-UAG, trnM-CAU, trnN-GUU(2), trnP-UGG, trnQ-UUG, trnR-ACG(2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC(2), trnV-UAC*, trnW-CCA, trnY-GUA |
| Small ribosomal subunit | rps2, rps3, rps4, rps7(2), rps8, rps11, rps12*(2), rps14, rps15, rps16*, rps18, rps19 |
| Large ribosomal subunit | rpl2*(2), rpl14, rpl16*, rpl20, rpl22, rpl23(2), rpl32, rpl33, rpl36 |
| DNA dependent RNA polymerase | rpoA, rpoB, rpoC1*, rpoC2 |
| Photosystem I | psaA, psaB, psaC, psaI, psaJ |
| Photosystem II |
psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ |
| Cytochrome b/f complex | petA, petB*, petD*, petG, petL, petN |
| Subunits of ATP synthase | atpA, atpB, atpE, atpF*, atpH, atpI |
| Protease | clpP** |
| Large subunit of rubisco | rbcL |
| NADH dehydrogenase |
ndhA*, ndhB*(2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK |
| Maturase | matK |
| Envelope membrane protein | cemA |
| Acetyl-CoA carboxylase | accD |
| c-type cytochrome Synthesis gene | ccsA |
| Open reading frames(ORF, ycf) | ycf1, ycf2(2), ycf3**, ycf4 |
*Indicates gene with one intron and **indicates gene with two introns. (2) indicates that the number of the repeat unit is 2. The rps12 gene is a trans-spliced gene.