Table 2.
Genotypic frequencies | Allelic frequencies | HWE | Ho | He | Ne | PIC | ||||
---|---|---|---|---|---|---|---|---|---|---|
DD | ID | II | D | I | ||||||
g.162140112A > G | 0.5259 | 0.4000 | 0.0741 | 0.7259 | 0.2741 | 0.9160 | 0.2705 | 0.7295 | 3.6966 | 0.7054 |
g.162149155G > C | 0.3990 | 0.4507 | 0.1502 | 0.6244 | 0.3756 | 0.4313 | 0.5310 | 0.4690 | 1.8834 | 0.3590 |
g.162149571C > T | 0.3768 | 0.4704 | 0.1527 | 0.6121 | 0.3879 | 0.8506 | 0.5251 | 0.4749 | 1.9043 | 0.3621 |
g.162153251G > A | 0.0785 | 0.1599 | 0.7616 | 0.1584 | 0.8416 | 0.0000 | 0.7333 | 0.2667 | 1.3636 | 0.2311 |
g.162156524C > T | 0.0630 | 0.2598 | 0.6772 | 0.1929 | 0.8071 | 0.0012 | 0.6886 | 0.3114 | 1.4522 | 0.2629 |
g.162158453C > T | 0.0542 | 0.3424 | 0.6034 | 0.2254 | 0.7746 | 0.6951 | 0.6508 | 0.3492 | 1.5365 | 0.2882 |
g.162160146 T > C | 0.0640 | 0.3596 | 0.5764 | 0.2438 | 0.7562 | 0.6167 | 0.6313 | 0.3687 | 1.5841 | 0.3007 |
g.162163775 T > G | 0.1141 | 0.4541 | 0.4318 | 0.3412 | 0.6588 | 0.8395 | 0.2769 | 0.7230 | 3.6112 | 0.6914 |
g.162166224G > A | 0.1404 | 0.4901 | 0.3695 | 0.3855 | 0.6145 | 0.4859 | 0.2841 | 0.7159 | 3.5198 | 0.6792 |
g.162166654 T > A | 0.1404 | 0.4901 | 0.3695 | 0.3855 | 0.6145 | 0.4859 | 0.2841 | 0.7159 | 3.5198 | 0.6792 |
g.162167165C > A | 0.1404 | 0.4901 | 0.3695 | 0.3855 | 0.6145 | 0.4859 | 0.2841 | 0.7159 | 3.5198 | 0.6792 |
g.162167314A > C | 0.1404 | 0.4901 | 0.3695 | 0.3855 | 0.6145 | 0.4859 | 0.2841 | 0.7159 | 3.5198 | 0.6792 |
g.162172653G > C | 0.1379 | 0.4926 | 0.3695 | 0.3842 | 0.6158 | 0.4084 | 0.2852 | 0.7148 | 3.5065 | 0.6779 |
g.162182976C > T | 0.0815 | 0.4370 | 0.4815 | 0.3000 | 0.7000 | 0.4143 | 0.2781 | 0.7219 | 3.5956 | 0.6935 |
g.162216538G > A | 0.4693 | 0.3464 | 0.1844 | 0.6425 | 0.3575 | 0.0000 | 0.5406 | 0.4594 | 1.8498 | 0.3539 |
HWE Hardy–Weinberg equilibrium, Ho homozygosity, He heterozygosity, Ne effective allele numbers, PIC polymorphic information content
PIC < 0.25, low polymorphism; 0.25 < PIC < 0.5, intermediate polymorphism; PIC > 0.5, high polymorphism
II = normal genotype; DD = mutation genotype; ID = heterozygote genotype