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. Author manuscript; available in PMC: 2023 Jan 4.
Published in final edited form as: Nat Methods. 2022 Mar 31;19(6):687–695. doi: 10.1038/s41592-022-01440-3

Extended Data Fig. 7 |. Mapping biases found and corrected.

Extended Data Fig. 7 |

On simulated HiFi reads, we found excessive clippings in highly identical satellite repeats in Minimap and Winnowmap by the time of evaluation. We have addressed this issue in Winnowmap 2.01+. Clipped (%) indicates the percentage of reads clipped in every 1024 bp window, shown in 0~40% range with a midline of 10%.