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. 2022 Dec 21;16(12):e0010993. doi: 10.1371/journal.pntd.0010993

Table 1. Summary of all models predicting mortality and infection status considered.

For each model, table provides prediction accuracy, number of species to which model was fit, method for evaluating model accuracy and lambda parameter used in ridge regression. The two models used to predict the infection characteristics of African mammals in Fig 1 are italicized.

Model Prediction accuracy Number of species Method for evaluating model accuracy lambda
Mortality 0.905 21 Leave-one-out CV 0.059
Infection status 0.802 363 AUC 1.9
Infection status (≧10 individuals sampled) 0.765 152 AUC 2.7
PCR only 0.655 279 AUC 2.9
Infection status (only free-ranging sampled) 0.757 359 AUC 0.3
NPC1 0.645 31 Leave-one-out CV 0.094
NPC1 + distance to spillover 0.58 31 Leave-one-out CV 0.118