(A–C) The bilateral hippocampal, vLOC and FFA ROIs used in trial-level pattern similarity analyses. (D–F) Bar graphs depict the average pair-specific, across-pair within-condition and across-pair between-condition pattern similarities in aversive and neutral conditions for the three ROIs. We conducted separate 2 (Emotion: aversive vs. neutral) by 3 (Measure: pair-specific vs. across-pair within-condition vs. across-pair between-condition) repeated-measures ANCOVA on each ROI, with individual’s univariate activation differences (i.e. aversive vs. neutral) in both initial and emotional learning phases as two covariates of no interest. For hippocampal pattern similarity, this analysis revealed a significant main effect of Emotion (F(1, 25)=11.10, p=0.003, partial η2=0.31) and an Emotion-by-Measure interaction (F(2, 50)=3.72, p=0.031, partial η2=0.13), but no main effect of Measure (F(2, 50)=0.62, p=0.541, partial η2=0.02). For vLOC pattern similarity, it also revealed a significant main effect of Emotion (F(1, 25)=8.45, p=0.008, partial η2=0.25), but neither a main effect of Measure (F(2,50) = 0.16, p=0.849, partial η2=0.01) nor an Emotion-by-Measure interaction (F(2, 50)=1.87, p=0.165, partial η2=0.07). For FFA pattern similarity, it revealed neither main effects of Emotion (F(1, 25)=2.30, p=0.142, partial η2=0.08) and Measure (F(2,50) = 0.53, p=0.591, partial η2=0.02) nor their interaction effect (F(2, 50)=0.06, p=0.938, partial η2=0.003). Bar graphs inside the red frame depict the average across-pair within-condition and across-pair between-condition pattern similarities in aversive and neutral conditions separately for the three ROIs. To directly compare the two across-pair similarities, we further conducted separate 2 (Emotion: aversive vs. neutral) by 2 (Measure: across-pair within-condition vs. across-pair between-condition) repeated-measures ANCOVA on each ROI, with above-mentioned covariates of no interest. Error bars represent standard error of mean. Notes: ~p < 0.10; *p<0.05; **p<0.01; two-tailed tests.