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. 2001 Apr;69(4):2416–2427. doi: 10.1128/IAI.69.4.2416-2427.2001

TABLE 1.

Housekeeping loci under studya

Locus Putative function of gene product Size of sequenced fragment (bp) No. of alleles identified No. of polymorphic nucleotide sites No. of polymorphic amino acid sites % Nucleotide divergence between pairs of alleles
Chromosomal location (no. of kb from ori)b GenBank no.
Maximum Average
gki Glucose kinase 498 34 36 12 2.6 1.3 1259 AJ302470AJ302503
gtr Glutamine transport ATP-binding protein 450 32 30 9 2.6 1 1237 AJ302504AJ302535
murl Glutamate racemase 438 24 21 6 1.4 0.8 313 AJ406970AJ406993
mutS DNA mismatch repair (HexA) 405 21 23 9 2.2 0.9 1788 AJ406994AJ407014
recP Transketolase 459 35 59 11 6.1 1.9 1392 AJ407015AJ407049
xpt Xanthine phosphoribosyltransferase 450 29 31 10 2.9 0.8 931 AJ291638AJ291666
yqiL Acetoacetyl-CoA thiolase (AtoB) 434 22 22 12 1.4 0.7 129 AJ291616AJ291637
a

Alleles of the seven housekeeping loci can be obtained (http://www.mlst.net). 

b

The emm gene is located at kb 1685, relative to the origin, based on the genome of GAS strain 700294 (www.genome.ou.edu; 10 February 2001). The size of the strain 700294 genome is 1,852 kb.