TABLE 1.
Sequences of probes for FISH of bacterial rRNAa
Probe | Position (bp) | Sequence | Reference |
---|---|---|---|
A. actinomycetemcomitans specific | 889–911 | 5′ CAC CAG GGC TAA ACC CCA AT 3′ | 37 |
P. gingivalis specific | 1054–1078 | 5′ GGT TTT CAC CAT CAG TCA TCT ACA 3′ | 37 |
EUB338 (universal for eubacteria) | 338–355 | 5′ GCT GCC TCC CGT AGG AGT 3′ | 40 |
EUB338 complement (negative control) | 338–355 | 5′ ACT CCT ACG GGA GGC AGC 3′ | 40 |
Archaea-specific (negative control) | 915–934 | 5′ GTG CTC CCC CGC CAA TTC CT 3′ | 1 |
References and base pair positions are relative to the E. coli rRNA sequence.