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. 2001 Apr;69(4):2700–2707. doi: 10.1128/IAI.69.4.2700-2707.2001

TABLE 1.

Sequences of probes for FISH of bacterial rRNAa

Probe Position (bp) Sequence Reference
A. actinomycetemcomitans specific 889–911 5′ CAC CAG GGC TAA ACC CCA AT 3′ 37
P. gingivalis specific 1054–1078 5′ GGT TTT CAC CAT CAG TCA TCT ACA 3′ 37
EUB338 (universal for eubacteria) 338–355 5′ GCT GCC TCC CGT AGG AGT 3′ 40
EUB338 complement (negative control) 338–355 5′ ACT CCT ACG GGA GGC AGC 3′ 40
Archaea-specific (negative control) 915–934 5′ GTG CTC CCC CGC CAA TTC CT 3′ 1 
a

References and base pair positions are relative to the E. coli rRNA sequence.