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. 2023 Jan 7;11:2. doi: 10.1186/s40168-022-01431-8

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© The Author(s) 2023

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 2 — Taxonomy classification of the Dataset of Oyster Virome (DOV) at the family level. A–C Pie charts showing the proportion of different viral families in the total viral contigs (vOTUs) longer than 800 bp. The vOTUs were classified using Diamond v0.9.24.125 (A), and vOTUs longer than 10 kb were classified using PhaGCN (B) and vContact2 (C). The numbers in parentheses indicate the number of vOTU successfully classified/total number of queries. D, E vContact2 networks constructed with vOTUs and NCBI RefSeq viral genomes (release March 2021) longer than 10 kb showing they have the same topology. The colors of the nodes indicate different PhaGCN families (D), and their sources (E). n, total number of nodes in vContact2 networks. The percentage of each family or source in D and E is listed after the corresponding legends