Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2022 Nov 9;51(D1):D1300–D1311. doi: 10.1093/nar/gkac966

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Figure 7. — Graphical representation of the features of FAVOR batch annotation and FAVORannotator. For small-scale annotation (up to 10 000 variants), batch annotation can be used for online annotation at the FAVOR website. For large-scale annotation, e.g. hundreds of millions of variants in a Whole Genome/Exome Sequencing (WGS/WES) study, FAVORannotator can be used for annotation in a local cluster or a cloud platform, e.g. Amazon Web Services (AWS) and Google Cloud Platform (GCP). FAVORannotator uses the FAVOR backend database, which is available in the SQL or CSV formats, and outputs an aGDS file that integrates genotype and annotation data in a single file.