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. 2022 Nov 14;51(D1):D232–D239. doi: 10.1093/nar/gkac1002

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© The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — The overall workflow of NPInter v5.0 data integration. ncRNA interactions were obtained by literature mining and high-throughput datasets processing. ChIRP-seq, CLIP-seq and AGO CLIP-seq datasets were processed to obtain RNA–DNA, lncRNA–protein and miRNA–mRNA interactions, respectively. CHART-seq, iMARGI, ChAR-seq and GRID-seq data were processed to obtain RNA–DNA interactions, which are newly added in this version of NPInter. Purple frames (SARS-CoV-2, scNPInter, RBP) indicate new modules integrated into NPInter v5.0.