Table 1.
Number of OGs annotated by the different source databases. OGs can be annotated by multiple sources. * New in eggNOG 6
| Source database | Archaea | Bacteria | Eukaryota | All OGs |
|---|---|---|---|---|
| BiGG* | 3 499 | 55 478 | 26 100 | 85 077 (0.50%) |
| CARD* | 0 | 2 692 | 42 | 2 734 (0.02%) |
| CAZy | 4 811 | 149 573 | 69 929 | 224 313 (1.32%) |
| GO Slim* | 99 013 | 2 244 774 | 3 316 629 | 5 660 416 (33.23%) |
| GO | 248 659 | 5 218 961 | 5 699 693 | 11 167 313 (65.56%) |
| KEGG | 136 708 | 2 310 290 | 2 471 461 | 4 918 459 (28.88%) |
| KEGG enzyme* | 67 028 | 1 090 786 | 745 655 | 1 903 469 (11.18%) |
| KEGG pathway | 76 683 | 1 290 367 | 1 373 997 | 2 741 047 (16.09%) |
| KEGG module | 33 573 | 484 270 | 230 624 | 748 467 (4.39%) |
| KEGG reaction* | 52 340 | 814 505 | 418 838 | 1 285 683 (7.55%) |
| PDB* | 5 765 | 56 295 | 93 943 | 156 003 (0.92%) |
| PFAM | 256 787 | 5 979 209 | 5 845 596 | 12 081 592 (70.93%) |
| SMART | 146 886 | 3 812 633 | 4 589 163 | 8 548 682 (50.19%) |
| All sources | 307 970 | 7 107 439 | 6 971 165 | 14 386 574 (84.46%) |
| All OGs | 381 650 | 8 257 748 | 8 393 509 | 17 032 907 (100.00%) |