Table 1.
Source | Reference | Description | No. of UViGs | No. of vOTUs |
---|---|---|---|---|
IMG/M mining with geNomad | (19) | Mining IMG/M’s public sequencing data using geNomad | 15 303 607 (5 202 181) | 8 452 288 (2 744 855) |
RefSeq r213 | (24) | Viral genomes imported from NCBI | 13 971 | 12 410 |
Inoviruses | (25) | Custom search of extrachromosomal and integrated Inoviridae genomes using marker genes and gene content features | 228 | 5281 |
Giant virus MAGs (GVMAGs) | (21) | Custom search for Nucleocytoviricota MAGs in IMG/M | 2055 | 2005 |
RVMT | (12) | Identification of Orthornavirae in IMG/M metatranscriptomes using a custom set of RNA-dependent RNA polymerase models. | 348 762 | 163 939 |