| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Deposited data | ||
| Raw and analyzed data | This paper | SRA: PRJNA868514 |
| Experimental models: Organisms/strains | ||
| Mouse: C57BL/6J | Pengyue Co., Ltd. (Jinan, China) | SCXK20190003 |
| Software and algorithms | ||
| Prism 9.0 | GraphPad Software | N/A |
| R version 4.0.2 | The R Foundation for Statistical Computing | https://www.r-project.org/ |
| Trimmomatic (version 0.40) | Bolger et al., 201442 | http://www.usadellab.org/cms/?page=trimmomatic |
| BMTagger | N/A | https://anaconda.org/bioconda/bmtagger |
| MEGAHIT | N/A | https://github.com/voutcn/megahit |
| Prodigal | N/A | http://prodigal.ornl.gov/ |
| DIAMOND | Buchfink et al., 201543 | https://github.com/bbuchfink/diamond |
| Kraken2 | N/A | https://github.com/DerrickWood/kraken2 |
| mZcloud | N/A | https://www.mzcloud.org/ |
| FastaQC | N/A | https://www.bioinformatics.babraham.ac.uk/projects/fastqc/ |
| HISAT2 | Kim et al., 201544 | http://daehwankimlab.github.io/hisat2/ |
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