Table 2. Genomes used in phylogenomic analyses.
Strains from this study are in bold. NA: not available.
| Species name | Strain | GenBank assembly accession | Host | Country | Reference |
|---|---|---|---|---|---|
| Botryosphaeria dothidea | sdau11-99 | GCA_011503125 | Malus sp. | China | [48] |
| Colletotrichum higginsianum | IMI 349063 | GCA_001672515 | Brassica rapa subsp. chinensis | Trinidad and Tobago | [49] |
| Cytospora chrysosperma | CFL2056 | NA | NA | Canada | PI permission |
| Cytospora leucostoma | SXYLt | GCA_003795295 | Prunus persica | China | [50] |
| Cytospora (Valsa) mali | 03–8 | GCA_000818155 | Malus sp. | China | [51] |
| Cytospora (Valsa) mali var. pyri | SXYL134 | GCA_000813385 | Malus sp. | China | [51] |
| Cytospora paraplurivora | FDS-564 | GCA_021272945 | Prunus persica var. nucipersica | Canada | This study |
| Cytospora piceae | CFCC52841 | GCA_016508685 | Picea crassifolia | China | PI permission |
| Diaporthe ampelina | DA912 | GCA_001006365 | Vitis vinifera | USA | [52] |
| Diaporthe helianthi | 7/96 | GCA_001702395 | Helianthus sp. | France | [53] |
| Macrophomina phaseolina | MS6 | GCA_000302655 | Corchorus olitorius | Bangladesh | [54] |
| Mollisia scopiformis | CBS 120377 | GCA_001500285 | Picea glauca | Canada | [55] |
| Neofusicoccum parvum | UCRNP2 | GCA_000385595 | Vitis vinifera | USA | [56] |
| Neurospora crassa | FGSC 73 | GCA_000786625 | NA | USA | [57] |
| Peltaster fructicola | LNHT1506 | GCA_001592805 | Malus sp. | China | [58] |
| Pyrenophora tritici-repentis | Ptr | GCA_000149985 | Triticum sp. | USA | [59] |
| Pyricularia oryzae | 70–15 | GCA_000002495 | Oryza sativa | USA | [60] |
| Zymoseptoria tritici | IPO323 | GCA_000219625 | Triticum sp. | Netherlands | [61] |