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. 2022 Dec 22;11:e82240. doi: 10.7554/eLife.82240
Name Sequence Purpose
E_flank_f GCTGGAGCCACTTGTAGCC cassette integration test locus 2, sequencing P0s
E_flank_r TCCTTGCTGAATCATTTTGTTC cassette integration test locus 2
P0_check_Fw GTGTGAGTGGCAGGGTAG sequencing P0s (together with E_flank_f)
qPCR_galK _Fw GCTACCCTGCCACTCACA estimating galK copy number
qPCR_galK _Rv CGCAGGGCAGAACGAAAC estimating galK copy number
rbsB_qPCR_Fw GGCACAAAAATTCTGCTGATTAA qPCR control locus
rbsB_qPCR_Rv GCAGCTCGATAACTTTGGC qPCR control locus
P1_P0-1 GCCTTAGTTGTAAGTGTCTACCAT GTCCCCGAACAAGTGTTCACTATG TCTAGGCCCGCACGCAAGAC integration of the selection and reporter cassette with P0-1 (Fw primer)
P1_P0-2 GCCTTAGTTGTAAGTGTCTACCAT GTCCCCGAACAAGTGTTCACTATG TCTCGGGGGGACAGCAGCG integration of the selection and reporter cassette with P0-2 (Fw primer)
P1_P0-3 GCCTTAGTTGTAAGTGTCTACCAT GTCCCCGAACAAGTGTTCACTATG TCTGTATTTGGGATGCGGGTAGTAGA integration of the selection and reporter cassette with P0-3 (Fw primer)
E_int_Rv TCGGAAGGGAAGAGGGAGTGCGGG AAATTTAAGCTGGATCACATATTGCC GAGGCCTTATGCTAGCTTC integration of the selection and reporter cassette (Rv primer)
E_int_Fw GCCTTAGTTGTAAGTGTCTACCATGTC CCCGAACAAGTGTTCACTATGTCACCG GAAAGACGGGCTTC integration of the selection and reporter cassette with P0 (Fw primer)
deep_seq_Fw TCGTCGGCAGCGTCAGATGTGTATAAG AGACAGACGGGTTCTTATGCCTTAGTT 1st step PCR for amplicon deep sequencing (with 5´nextera anchor for Illumina sequencing)
deep_seq_Rv GTCTCGTGGGCTCGGAGATGTGTATAA GAGACAGGTGTGAGTGGCAGGGTAG 1st step PCR for amplicon deep sequencing (with 5´nextera anchor for Illumina sequencing)