Table 2.
HAV genotypes and subtypes and their geographical distributions.
Hepatitis A virus genotypes | Hepatitis A virus subtypes | Geographical distribution | Comments | References |
---|---|---|---|---|
Genotype I | A, B, C | Subgenotype IA was reported in China, Japan, Turkey, Russia, Hungary, the United States of America (US), and Germany | (i) Infecting humans, the most frequent genotype is the I genotype. The IA subgenotype is more frequent than IB | [22, 24, 38, 40–42] |
(ii) Genotype IA was most common among strains tested in US outbreak investigations and surveillance during 1996–2015 | ||||
Subgenotype IB has been reported in Turkey, the Netherlands, Hungary, France, Italy, Bulgaria, and Egypt | (iii) Genotype IB gained prominence during 2016–2019 person-to-person multistate outbreaks | |||
(iv) Subgenotype IB is the most prevalent genotype in Turkey | ||||
(v) The cell culture-adapted viruses most commonly used are variants of the Australian strain HM175 (genotype IB) and the German strain GBM (genotype IA) | ||||
| ||||
Genotype II | A, B | Until today, only a few cases of genotype II have been reported | Infect humans | [22, 24, 29, 38, 40, 43, 44] |
With potential African origin of IIA strains and occasionally found in France | ||||
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Genotype III | A, B | Genotype III has a worldwide distribution pattern. Subgenotype IIIB is mainly seen in Japan | Infect humans | [22, 24, 29, 38, 40, 41, 43, 44] |
Subgenotype IIIA has been reported in Iran, The Netherlands, South Korea, Japan, Afghanistan, Turkey, and India |