Table 2.
Results of RNA Sequencing and Quality Assessment of RNA Samples
| Sample | Raw reads | Raw bases (Gb) | Clean reads | Clean bases (Gb) | Q20 (%) | GC content (%) |
|---|---|---|---|---|---|---|
| Con-L1 | 66,259,650 | 6.69 | 65,607,986 | 6.59 | 98.42 | 45.2 |
| Con-L2 | 55,434,156 | 5.60 | 54,962,178 | 5.52 | 98.57 | 45.35 |
| Con-L3 | 58,930,768 | 5.95 | 58,398,792 | 5.86 | 98.53 | 45.22 |
| Con-S1 | 53,298,506 | 5.38 | 52,863,070 | 5.31 | 98.62 | 45.69 |
| Con-S2 | 61,049,516 | 6.17 | 60,512,276 | 6.08 | 98.54 | 45.74 |
| Con-S3 | 63,169,376 | 6.38 | 62,614,996 | 6.29 | 98.55 | 46.62 |
| RGDF-L1 | 72,404,768 | 7.31 | 71,721,136 | 7.20 | 98.43 | 45.07 |
| RGDF-L2 | 61,624,296 | 6.22 | 61,083,268 | 6.13 | 98.51 | 45.21 |
| RGDF-L3 | 61,332,176 | 6.19 | 60,701,026 | 6.09 | 98.39 | 45.57 |
| RGDF-S1 | 53,220,054 | 5.38 | 52,695,518 | 5.29 | 98.44 | 45.76 |
| RGDF-S2 | 61,740,572 | 6.24 | 61,187,016 | 6.14 | 98.53 | 45.43 |
| RGDF-S3 | 70,835,332 | 7.15 | 70,260,936 | 7.06 | 98.61 | 45.38 |