Table 1. Sequence summary of the curated CLso haplotype database.
Region | A | B | C | Cras1a* | Cras1b* | Cras2 | D | E | F | G | H | H-Con | U | Grand total |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Genomic | 4 | 1 | 2 | 1 | 8 | |||||||||
16S | 5 | 8 | 6 | 13 | 3 | 3 | 9 | 5 | 1 | 3 | 1 | 2 | 1 | 60 |
16S, 16–23S | 1 | 1 | ||||||||||||
16S, 16–23S, 5S | 3 | 3 | ||||||||||||
16–23S | 1 | 16 | 15 | 3 | 4 | 23 | 7 | 3 | 1 | 1 | 74 | |||
50S | 2 | 2 | 29 | 18 | 3 | 4 | 16 | 8 | 1 | 4 | 1 | 5 | 93 | |
adk | 31 | 1 | 4 | 1 | 5 | 42 | ||||||||
atpA | 31 | 1 | 4 | 1 | 5 | 42 | ||||||||
fbpA | 31 | 1 | 4 | 1 | 5 | 42 | ||||||||
ftsZ | 30 | 1 | 4 | 2 | 5 | 42 | ||||||||
glyA | 31 | 1 | 4 | 1 | 5 | 42 | ||||||||
groEL | 31 | 1 | 4 | 1 | 5 | 42 | ||||||||
gyrB | 31 | 1 | 4 | 2 | 5 | 43 | ||||||||
omp | 11 | 3 | 4 | 1 | 19 | |||||||||
Grand total | 13 | 11 | 272 | 57 | 12 | 15 | 56 | 20 | 3 | 38 | 12 | 2 | 42 | 553 |
Note:
Cras1a and Cras1b are sub-categories of haplotype Cras1.