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. 2022 Nov 9;8(11):mgen000890. doi: 10.1099/mgen.0.000890

Table 1.

List of R (version 4.0.3) packages used in this study

Package name

Version

Reference

Tidyverse

1.3.0

 

Biostrings

2.54.0

 

GenomicRanges

1.38.0

 

Ggbio

1.34.0

[59]

XML

3.99–0.3

 

RCurl

1.98–1.1

 

Ringo

1.50.0

[60]

BSgenome

1.54.0

 

ggExtra

0.9

 

DescTools

0.99.34

 

coRdon

1.4.0

[61]

rlist

0.4.6.1

 

genoPlotR

0.8.9

[60]

reorientateCircGenomes

0.0.1

This study