Figure 12.

Analysis of the top five Biological Process terms in compa2.

(A) Venn diagram of the three sets of Gene Ontology-Biological Process (GO-BP) terms concerning the neural axon. The protein UniProt accession number and gene names are used. Seven proteins are common between the three sets of terms: NFH, NFM, NFL, APOD precursor, APOE precursor, LAMB2, and CNTF. (B) Analysis of protein-protein interaction by STRING. Protein network data of 17 irredundant proteins related to the axon and 16 irredundant proteins related to oxidative stress. Five clusters are indicated in yellow, red, green, light blue, and dark blue. The color code of edges reflects the type of interaction evidence shown in the table. Three main clusters can be seen: antioxidants (yellow), axon-related proteins (red), and lipid proteins (green). compa2: Comparison between sciatic nerve crush and wild-type rats 1 month after injury; SNC: sciatic nerve crush; WT: wild-type.