Table 1. Imaging parameters for the different experiments described.
Experiment | Objective | Fluorochrome(Excitation/emission wavelengths) | Image spacing in z | Exposure time per image | Number of Image stacks | Total time | Volume(x, y, z) |
---|---|---|---|---|---|---|---|
Microspheres (Matrigel) | 60× | DragonGreen (490/507–530 nm) |
41 slices, 1 µm apart | 16ms | 60 | 64 s | 225.3 µm × 84.5 µm×40 µm |
tdTomato parasites (550/579–608 nm) | |||||||
Fibrin vs Matrigel and TgMIC2 KO directionality | 20× | Hoechst 33342 (385/420–449 nm) |
41 x 1 µm |
16ms | 120 | 80 s | 665.6 µm × 249.6 µm×40 µm |
Force Mapping, WT (Fibrin) | 60× | tdTomato parasites (550/579–608 nm) |
50x0.5 µm | 16ms | 60 | 96 s | 225.3 µm × 84.5 µm×24.5 µm |
Fibrin (635/666–723 nm) | |||||||
WT, TgMyoA KO, TgMIC2 KO; Brightfield (Matrigel, fibrin) |
60× | N/A: Brightfield | 21 x 1 µm |
40ms | 360 | 302 s | 225.3 µm × 225.3 µm×20 µm |
Nuclear size vs constriction (Matrigel) |
20× | Hoechst 33342 (385/420–449 nm) |
41 x 1 µm |
16ms | 60 | 80 s | 665.6 µm × 249.6 µm×40 µm |
Anti-SAG1 Alexa 548 (550/579–608 nm) | |||||||
TgMyoA KO Force Map (Fibrin) |
60× | Hoechst 33342 (385/420–449 nm) |
50x0.5 µm | 16ms | 60 | 96 s | 225.3 µm × 84.5 µm×24.5 µm |
Fibrin (635/666–723 nm) | |||||||
TgMIC2 KO Force Map (Fibrin) |
60× | YFP cytosol (490/507–530 nm) | 50x0.5 µm | 16ms | 60 | 96 s | 225.3 µm × 84.5 µm×24.5 µm |
Fibrin (635/666–723 nm) |