Table 3:
A summary of the structures and functions of the alphaviral nsPs
Protein | Structures | Functions |
---|---|---|
nsP1 | methyl transferase domain, guanyl transferase domain, membrane association domains | caps viral RNA making it usable by ribosomes, anchors the replication machinery to cellular membranes111,129–131,133–136 |
nsP2 | helicase domain, ADP binding region, cysteine protease, methyl transferase like domain | unwinds viral RNA for replication, cleaves the polyprotein into its constitutive parts, digests host cell proteins77,132,138–142,144–146,152–157 |
nsP3 | macrodomain, alphavirus unique domain, hypervariable domain | poorly described, necessary for replication, highly involved in host cell interactions129,160–168,170–172,174,175 |
nsP4 | RNA dependent RNA polymerase domain | synthesizes new viral RNA71,77,129,176–178,180–182,185 |