TABLE 3.
Pairwise alignment scores
| Strain | Value for groupa:
|
||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| a
|
b
|
c
|
d
|
e
|
f | ||||||||||||
| FA19 | FA1090 | UU1008 | 4102 | Pgh3-2 | M982 | B:15, P1.16 | B16B6 | Q8 | 4223 | DL63 | PAK | MinnA | Eagan | h49 | h171 | h196 | |
| FA19 | 97.5 | 96.7 | 96.5 | 97.9 | 96.2 | 95.7 | 85.1 | 56.2 | 55.9 | 60.6 | 60.2 | 60.0 | 60.0 | 52.9 | 53.3 | 52.5 | |
| FA1090 | 96.2 | 98.8 | 97.6 | 96.0 | 96.6 | 94.8 | 80.0 | 57.1 | 56.3 | 60.6 | 60.8 | 60.8 | 60.8 | 52.8 | 53.4 | 52.5 | |
| UU1008 | 95.1 | 97.3 | 98.5 | 96.0 | 96.9 | 94.4 | 85.8 | 56.6 | 55.3 | 60.6 | 60.7 | 60.1 | 60.1 | 53.3 | 53.8 | 52.3 | |
| 4102 | 96.1 | 97.3 | 98.1 | 96.0 | 94.9 | 94.2 | 80.2 | 56.0 | 55.7 | 61.0 | 60.8 | 60.6 | 60.6 | 52.6 | 53.2 | 52.3 | |
| Pgh3-2 | 97.4 | 95.5 | 95.5 | 95.4 | 95.7 | 95.7 | 80.2 | 56.0 | 55.9 | 60.6 | 60.8 | 60.0 | 60.0 | 53.3 | 53.6 | 51.8 | |
| M982 | 94.5 | 94.3 | 94.2 | 94.2 | 94.2 | 96.9 | 85.8 | ||||||||||
| B:15, P1.16 | 95.1 | 94.3 | 93.5 | 93.6 | 95.1 | 96.7 | 80.5 | ||||||||||
| B16B6 | 76.0 | 76.3 | 75.9 | 76.2 | 76.2 | 77.0 | 76.9 | ||||||||||
| Q8 | 49.2 | 49.9 | 49.2 | 48.9 | 48.9 | ||||||||||||
| 4223 | 48.7 | 49.2 | 48.1 | 48.6 | 48.8 | ||||||||||||
| DL63 | 51.7 | 52.0 | 52.0 | 52.4 | 52.6 | ||||||||||||
| PAK | 51.6 | 52.1 | 52.0 | 52.3 | 52.6 | ||||||||||||
| MinnA | 51.6 | 52.2 | 51.9 | 52.1 | 52.0 | ||||||||||||
| Eagan | 51.6 | 52.2 | 51.9 | 52.1 | 52.0 | ||||||||||||
| h49 | 44.1 | 44.1 | 44.8 | 44.1 | 44.6 | ||||||||||||
| h171 | 44.7 | 44.4 | 45.0 | 44.4 | 45.3 | ||||||||||||
| h196 | 43.7 | 43.2 | 43.4 | 43.2 | 43.0 | ||||||||||||
a
Strains are grouped by genus and species using the following abbreviations: a, N. gonorrhoeae; b, N. meningitidis; c, M. catarrhalis; d, H. influenzae; e, A. pleuropneumoniae; f, P. haemolytica. Percent similarity scores are shown in boldface; percent identity scores are shown in lightface.