Table 1. The performances of the classifiers (ARGs related training cohort).
Algorithm | TP rate | FP rate | Precision | Recall | F-Measure | MCC | ROC area | PRC area |
---|---|---|---|---|---|---|---|---|
Random forest | 0.907 | 0.093 | 0.908 | 0.907 | 0.907 | 0.815 | 0.975 | 0.976 |
J48 | 0.907 | 0.093 | 0.908 | 0.907 | 0.907 | 0.815 | 0.894 | 0.855 |
IBK | 0.926 | 0.074 | 0.928 | 0.926 | 0.926 | 0.854 | 0.940 | 0.912 |
SMO | 0.926 | 0.074 | 0.928 | 0.926 | 0.926 | 0.854 | 0.926 | 0.895 |
Logistic regression | 0.778 | 0.222 | 0.779 | 0.778 | 0.777 | 0.557 | 0.849 | 0.815 |
ARGs, autophagy-related genes; TP, true positive; FP, false positive; MCC, Mathew correlation coefficient; ROC, receiver operating characteristic; PRC, precision recall curve; IBK, K-nearest neighbours; SMO, sequential minimal optimization.