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. 2023 Jan 16;24:25. doi: 10.1186/s12864-023-09113-x

Table 1.

Whole genome resequencing results of Apostichopus japonicus

Groups Reads mapping rate % Q20% Q30% GC% Average sequencing depth Number of SNPs The proportion of heterozygous loci%
BSD 81.29 94.16 88.04 37.45 10.77 9,141,887.40 0.22
PD 86.23 95.75 90.75 37.89 11.98 8,941,680.23 0.21
HLW 89.36 95.49 90.92 39.82 12.44 9,211,083.43 0.23
SD 80.89 94.62 88.95 37.70 11.25 8,808,006.8 0.20
XXM 87.07 96.04 91.16 37.74 13.03 8,730,540.47 0.22
LS 90.28 95.84 91.39 39.55 12.22 9,059,672.47 0.21
RUS 88.40 95.41 90.82 40.02 12.41 9,173,089.17 0.22