Figure 5.

Gene ontology analysis. Gene ontology analysis was performed using the 100 proteins with highest accumulated absolute centroid values. The LFQ intensity for these proteins were normalized across all samples and those with values above 0 were analyzed using the PANTHER classification system based on protein class. Panels A–D are sorted from no infection (cortex 4 DPI and 10 DPI) to most infection (interface 10 DPI and SAC 10 DPI). The total number of proteins in each cluster are as follows: (A) 31, (B) 28, (C) 47, and (D) 48. Panel E shows three protein classes with differences among regions of infection versus no infection, and the total number of proteins in each class.