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A scatter plot showing PP values and the relationship to gene concordance factors (gCF) and site concordance factors (sCF) (gene tree analysis). The red numbers coincide with the branch numbers of Table 4 and Fig. 3B scatter plot showing p-value (polytomy test) and the relationship to gene discordance factors (paraphyly) (gDFP). Points show each bipartition in the full dataset phylogeny, with red numbers coinciding with the branch numbers in Fig. 3 and Table 4.
