Table 2.

Performance comparison under different protein language models.

	TPR	TNR	Pre	ACC	F1	MCC	AUROC	AP
Dset_448
ESM-1b	0.725	0.652	0.246	0.662	0.368	0.264	0.759	0.349
ProGen2	0.714	0.602	0.220	0.617	0.336	0.218	0.715	0.287
ProtT5	0.448	0.916	0.455	0.852	0.451	0.366	0.810	0.442
Dset_72
ESM-1b	0.674	0.678	0.199	0.678	0.307	0.226	0.738	0.253
ProGen2	0.684	0.554	0.154	0.568	0.251	0.147	0.658	0.176
ProtT5	0.336	0.908	0.303	0.848	0.319	0.234	0.770	0.300
Dset_164
ESM-1b	0.732	0.542	0.261	0.576	0.375	0.211	0.690	0.324
ProGen2	0.758	0.436	0.229	0.495	0.352	0.153	0.650	0.288
ProtT5	0.308	0.909	0.427	0.800	0.358	0.248	0.740	0.384