Table 4.

Detailed results on the short contigs under the tools’ default score cutoff (0.5)

Tool	Criterion	100–400	400–800	800–1200	1200–1800
PhaTYP	Sensitivity	0.86	0.91	0.93	0.93
	Specificity	0.92	0.92	0.93	0.94
	Accuracy	0.89	0.91	0.93	0.94
	Sensitivity	0.83	0.85	0.87	0.92
without	Specificity	0.92	0.93	0.92	0.93
SLL task	Accuracy	0.87	0.89	0.90	0.92
DeePhage	Sensitivity	0.74	0.84	0.86	0.89
	Specificity	0.77	0.82	0.86	0.87
	Accuracy	0.76	0.83	0.86	0.88
PhagePred	Sensitivity	0.56	0.60	0.62	0.64
	Specificity	0.75	0.80	0.84	0.87
	Accuracy	0.65	0.70	0.72	0.75
PHACTS	Sensitivity	0.26	0.36	0.39	0.42
	Specificity	0.73	0.64	0.65	0.69
	Accuracy	0.48	0.49	0.51	0.54
PhaTYP	Sensitivity	0.86	0.92	0.92	0.94
(augmentation)	Specificity	0.90	0.92	0.93	0.94
	Accuracy	0.88	0.92	0.93	0.94