TABLE 3.

IS elements in pYVe8081

IS element homologya	Accession no./organism	Position (bp)	Gene(s) present	Terminal repeats
IS1541C	AJ238015/Y. enterocolitica	65189–65896	Tpase	2 target junctions
ISYen1	AF074611/Y. pestis pMT1	49547–50841	Tpase	2
ISYen1-partial	AF074611/Y. pestis pMT1	61626–61012	Tpase-partial	1
ISYen1-like	AF074611/Y. pestis pMT1	7042–7717	Tpase-partial	2
IS4-like	J01733/E. coli	64438–63045	Tpase-partial	1
IS4F-like	J01735/E. coli	63044–62167	Tpase-partial	2
IS1400	AJ132945/Y. enterocolitica HPIb	1207–1631	orfA, orfB-partial	1
IS1400-like	AJ132945/Y. enterocolitica HPI	48833–49484	orfA-partial, orfB-partial	1-partial
IS1400-like	AJ132945/Y. enterocolitica HPI	53508–54155	orfB-partial	None found
IS1353-like	AP000342/plasmid R100	587–1210	orfA-partial	1
IS1353-like	AP000342/plasmid R100	1653–2138	orfB-partial	1
IS1328-like	AJ132945/Y. enterocolitica HPI	54574–54178	Tpase-partial	1
IS1328-like	AJ132945/Y. enterocolitica HPI	64446–65180	Tpase-partial	1
IS1327-like	X87144/Erwinia herbicola	42188–41782	Tpase-partial	1
Tn1-like	L10085/plasmid RP4	60315–61006	Tpase-partial	None found
ISpG5-like	AF224744/Porphyromonas gingivalis	40159–39760	Tpase-partial	None found
IS5377-like	X67862/Bacillus stearothermophius	45731–45611	Tpase-partial	None found
IS1477a-like	U62552/Xanthomonas campestris	5174–5039	orfB-partial	None found

^aIS-like denotes an IS remnant with less than 90% DNA identity to the GenBank match. IS-partial denotes a truncated isoform. 

^bHPI, high pathogenicity island.