Table 5.
Mitochondrial DNA variants identified in whole transcriptome data of control and SARS-CoV-2 infected patients’ tissue, blood, and infected cell line model.
| Subjects | SARS-CoV-2 status | Subject ID | Tissue type | No. of variants | Reference |
|---|---|---|---|---|---|
| Autopsy samples from patients deceased due to SARS-Cov2 infection | Positive | SRR12340086 SRR12340087 SRR12340088 SRR12340089 |
Lung-RLL Lung-RML Lung-RUL Lung-LUL |
79 68 73 77 |
Desai et al., 2020 |
| Transcriptional profile of leukocytes in PCR negative COVID-19 controls | Negative | SRR12313439_control SRR12313441_control SRR12313442_control SRR12313444_control SRR12313446_control SRR12313449_control SRR12313450_control |
leukocyte | 32 12 17 11 47 8 16 |
Gill et al., 2020 |
| Transcriptional profile of leukocytes in PCR positive COVID-19 patients | Positive | SRR12313440_covid SRR12313443_covid SRR12313445_covid SRR12313447_covid SRR12313448_covid SRR12313451_covid SRR12313452_covid |
leukocyte | 10 14 29 28 22 23 25 |
|
| Primary human lung epithelium (NHBE) were mock-treated | Negative | NHBE_1 NHBE_2 NHBE_3 |
Primary human lung epithelium (NHBE) | 15 15 15 |
Blanco-Melo et al., 2020 |
| Primary human lung epithelium (NHBE) were infected with SARS-CoV-2. | Positive | NHBE_4 NHBE_5 NHBE_6 |
Primary human lung epithelium (NHBE) | 15 15 16 |
|
| Uninfected human lung biopsies | Negative | Healthy_1 Healthy_2 |
Lung tissue | 22 35 |
|
| lung samples derived from COVID-19 deceased patient | Positive | Covid_1 Covid_2 |
Lung tissue | 50 55 |
# Lung-RLL, right lower lobe, Lung-RML, right middle lobe, Lung-RUL, right upper lobe,