TABLE 1.
Species and strain | Source (location) or genotype | cepI | cepR | bviI | bviR | cepI reporter bioassay | Reference or source |
---|---|---|---|---|---|---|---|
B. cepacia genomovar I | |||||||
ATCC 25416 | Onion (United States) | +a | + | −b | − | + | 18 |
ATCC 17759 | Soil (Trinidad) | + | + | − | − | + | 18 |
CEP509 | CF (Australia) | + | + | − | − | + | 18 |
B. multivorans | |||||||
C5393 | CF (Canada) | − | + | − | − | + | 18 |
249-2 | Laboratory (United States) | − | + | − | − | + | 18 |
LMG13010 | CF (Belgium) | − | + | − | − | + | 18 |
B. cepacia genomovar III | |||||||
J2315 | CF (United Kingdom) | + | + | − | − | + | 18 |
K56-2 | CF (Canada) | + | + | − | − | + | 18 |
C5424 | CF (Canada) | + | + | − | − | + | 18 |
K56-I2 | cepI::tmp | + | + | − | − | + | 16 |
K56-R2 | cepR::Tn5-OT182 | + | + | − | − | + | 16 |
B. stabilis | |||||||
LMG14294 | CF (Belgium) | + | + | − | − | + | 18 |
LMG14291 | CF (Belgium) | + | + | − | − | + | 18 |
LMG07000 | Blood (Sweden) | + | + | − | − | + | 18 |
B. vietnamiensis | |||||||
PC259 | CF (United States) | + | + | + | + | + | 18 |
LMG15232 | CF (Sweden) | + | + | + | + | + | 18 |
LMG10929 | Rice (Vietnam) | + | + | + | + | + | 18 |
G4c | Environment | + | + | + | + | + | B. Conway |
DBO1c | Environment | + | + | + | + | + | 33 |
B. cepacia genomovar VI | |||||||
LMG18943 | CF | − | + | − | − | + | 3 |
LO6 | CF | − | + | − | − | + | 3 |
B. cepacia genomovar VII | |||||||
ATCC 53266 | Soil (United States) | − | − | − | − | + | T. Coenye |
CEP996 | CF (Australia) | − | − | − | − | + | T. Coenye |
AMMD | Biocontrol strain | − | − | − | − | + | T. Coenye |
+, presence of the gene or activity in the autoinducer bioassay.
−, absence of the gene or the activity in the autoinducer bioassay.
Typed as B. vietnamiensis by the Cystic Fibrosis Foundation B. cepacia research laboratory and repository (J. LiPuma, personal communication).