Table 3.
SNPs | Genotypic Frequencies | Allelic Frequency |
He | Ho | Ne | PIC | χ2 | |||
---|---|---|---|---|---|---|---|---|---|---|
g.42101G>T | GG | GT | TT | G | T | 0.498 | 0.502 | 1.991 | 0.374 | 1.833 |
0.244 (40) | 0.445 (73) | 0.311 (51) | 0.466 | 0.534 | ||||||
g.60146A>T | AA | AT | TT | A | T | 0.480 | 0.520 | 1.922 | 0.365 | 2.482 |
0.390 (64) | 0.421 (69) | 0.189 (31) | 0.601 | 0.399 | ||||||
g.61455G>A | GG | GA | AA | G | A | 0.499 | 0.501 | 1.996 | 0.375 | 0.649 |
0.213 (35) | 0.530 (87) | 0.256 (42) | 0.479 | 0.521 |
Note: HE, heterogeneity; HO, pureness; NE, effective allele; PIC, polymorphic information content; PIC < 0.25 implies low polymorphism; 0.5 > PIC > 0.25 denotes moderate polymorphism; PIC > 0.5 suggests high polymorphism; χ2 < 5.99 denotes Hardy-Weinberg equilibrium; χ2 > 5.99 signifies Hardy-Weinberg disequilibrium.