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. 2022 Nov 21;119(48):e2213170119. doi: 10.1073/pnas.2213170119

Table 1.

Stabilities of DHFRMp variants fused to eGFP in bulk solution and in the GroE and thermosome cavities

Protein* Exposed surface area of mutated residue in the native state (Å2) Percent area of mutated residue exposed in the native state Stability in bulk solution (kcal mol−1) Change in stability in bulk solution upon mutation (kcal mol−1) Stability in the cavity (kcal mol−1) Change in stability in the cavity upon mutation (kcal mol−1)
WT in GroE§ - - −3.45 ± 0.09 - 2.4 ± 0.2 -
WT in (αβ)4 - - −3.45 ± 0.09 - 2.7 ± 0.3 -
WT in β9 - - −3.45 ± 0.09 - 3.3 ± 0.2 -
L9V in GroE 4.0 3.5 −2.60 ± 0.13 0.85 ± 0.15 3.7 ± 0.3 1.3 ± 0.4
I41V in GroE 0.0 0 −2.95 ± 0.07 0.50 ± 0.11 1.6 ± 0.1 −0.8 ± 0.2
I61V in GroE 0.1 0 −3.16 ± 0.07 0.29 ± 0.11 2.2 ± 0.2 −0.2 ± 0.3
L93V in GroE 5.4 4.0 −1.52 ± 0.18 1.93 ± 0.20 0.9 ± 0.1 −1.5 ± 0.2
I95V in GroE 5.8 3.5 −3.03 ± 0.09 0.42 ± 0.13 2.8 ± 0.3 0.4 ± 0.4

*Single-letter notation of amino acids is used.

Values represent averages for the two dihydrofolate reductase chains (A and B) related by noncrystallographic symmetry in the crystal structure (PDB ID: 2zza). The solvent-accessible surface areas for each residue listed were calculated using PyMOL.

The changes in stability in bulk solution and in the cavity upon mutation were calculated as: ∆G(mutant) – ∆G(wild-type).

§The data for wild-type DHFRMp in the chimera were reported before (23).