ERVs |
endogenous retroviruses |
REs |
retrotransposon |
TEs |
transposable elements |
LTRs |
long terminal repeats |
dsRNA |
double-stranded RNA |
TLR3 |
toll-like receptor 3 |
RIG-I |
retinoic-acid-inducible gene I |
MDA5 |
melanoma differentiation-associated gene 5 |
IFNAR |
type I interferon receptor |
JAK |
Janus-activated kinase |
STAT2 |
signal transducer and activator of transcription 2 |
IRF9 |
IFN regulatory factor 9 |
ISG |
IFN-stimulated gene |
ISGF3 |
IFN-stimulated gene factor 3 |
ISRE |
interferon-stimulated regulatory element |
GAS |
IFN-γ-activated site |
IRF1 |
interferon regulatory factor 1 |
KO |
knockout |
DAVID |
Database for Annotation, Visualization, and Integrated Discovery |
GO |
Gene Ontology |
KEGG |
Kyoto Encyclopedia of Genes and Genomes |
PPI |
Protein–protein interaction |
DE |
differentially expressed |
STRING |
Search Tool for the Retrieval of Interacting Genes |
PCA |
principal component analysis |
BP(s) |
biological process(es) |
CC |
cell component |
MF |
molecular function |
TFBSs |
transcription factors binding sites |
AP |
activator protein |