Table 1.
Sample Name | Raw Reads | Clean Reads | Aligned Reads | Mapping Efficiency (%) |
---|---|---|---|---|
IPC_1 | 48,966,509 | 48,836,418 | 46,192,763 | 94.59 |
IPC_2 | 53,966,608 | 53,824,700 | 50,887,777 | 94.54 |
IPC_3 | 58,966,608 | 58,712,210 | 53,254,093 | 94.47 |
IPT_1 | 51,707,279 | 49,000,200 | 41,855,876 | 85.42 |
IPT_2 | 52,207,282 | 49,475,010 | 42,261,648 | 85.42 |
IPT_3 | 52,207,282 | 49,475,010 | 42,261,648 | 85.42 |
NPC_1 | 54,547,228 | 53,298,510 | 49,754,853 | 93.35 |
NPC_2 | 45,738,722 | 42,088,332 | 39,179,553 | 93.08 |
NPC_3 | 45,312,718 | 44,272,050 | 41,333,550 | 93.36 |
NPT_1 | 55,322,536 | 55,124,818 | 51,637,008 | 93.67 |
NPT_2 | 65,243,028 | 64,132,208 | 59,876,829 | 93.36 |
NPT_3 | 60,373,548 | 60,267,168 | 56,349,061 | 93.50 |
(IPC = IR 64, panicle, control; IPT = IR 64, panicle, drought-treated; NPC = N 22, panicle, control; NPT = N 22, panicle, drought-treated).