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. 2023 Jan 5;24(2):1050. doi: 10.3390/ijms24021050

Table 2.

Microbial reference database details: Information regarding reference database sources, including number of entries, size, URL, and version information.

Organism Type No. of Reference Proteomes No. of Protein Entries Size (GB) URL/Directory
Virus 10,062 517,610 0.18 https://ftp.uniprot.org/pub/databases/uniprot/current_release/knowledgebase/reference_proteomes/Viruses/ (release no. 2021_3; accessed on 2 June 2021)
Fungi 784 8,370,376 4.61 https://www.uniprot.org/uniprot/?query=proteome%3a(taxonomy%3a%22Fungi+%5b4751%5d%22+AND+reference%3ayes) (release no. 2021_3; accessed on 2 June 2021)
Bacteria 2087 5,044,213 1.89 http://homd.org/ftp/genomes/PROKKA/current/faa/ (ver 9.1.4: accessed on 9 September 2020)