Table 1.
Overview of the RNA sequencing data.
| Sample | Raw Reads | Clean Reads | Q20 (%) | Q30 (%) | GC Content (%) | Total Mapped (%) |
|---|---|---|---|---|---|---|
| Mock 1 | 93772488 | 91548686 | 98.17 | 94.83 | 54.04 | 86282174 (94.25%) |
| Mock 2 | 93224184 | 89721222 | 98.16 | 94.81 | 54.85 | 85032843 (94.77%) |
| Mock3 | 89685878 | 87053146 | 98.16 | 94.80 | 54.50 | 81428341 (93.54%) |
| PRRSV1 | 91868782 | 88302932 | 97.78 | 94.06 | 53.83 | 76908982 (87.1%) |
| PRRSV2 | 96897448 | 94476562 | 98.32 | 95.14 | 52.24 | 81424721 (86.19%) |
| PRRSV3 | 107694804 | 105835468 | 98.31 | 95.14 | 52.59 | 91366566 (86.33%) |
| Average | 95523931 | 92823003 | 98.15 | 94.80 | 53.68 | 83740605 (90.36%) |