Table 1.
Sample | Total Reads | Total Bases |
Clean Reads | Clean Bases |
Q20 Rate (%) | Q30 Rate (%) | GC (%) |
---|---|---|---|---|---|---|---|
CK-1 | 45,863,972 | 6,879,595,800 | 44,915,008 | 6,680,680,398 | 97.85 | 93.46 | 44.94 |
CK-2 | 47,993,664 | 7,199,049,600 | 47,205,020 | 7,025,130,948 | 98.10 | 94.05 | 44.77 |
CK-3 | 53,683,124 | 8,052,468,600 | 52,814,730 | 7,734,007,771 | 98.03 | 93.87 | 44.67 |
average | 49,180,253 | 7,377,038,000 | 48,311,586 | 7,146,606,372 | 97.99 | 93.79 | 44.79 |
Ht-1 | 51,810,464 | 7,771,569,600 | 50,974,272 | 7,534,318,727 | 98.02 | 93.85 | 45.00 |
Ht-2 | 45,663,096 | 6,849,464,400 | 44,953,364 | 6,625,104,742 | 98.10 | 94.07 | 45.65 |
Ht-3 | 50,863,920 | 7,629,588,000 | 49,951,766 | 7,400,820,966 | 98.22 | 94.44 | 45.24 |
average | 49,445,827 | 7,416,874,000 | 48,626,467 | 7,186,748,145 | 98.11 | 94.12 | 45.30 |